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<art><ui>1556-276X-7-416</ui><ji>1556-276X</ji><fm><dochead>Nano Express</dochead><bibl><title><p>Silicon-based photonic crystals fabricated using proton beam writing combined with electrochemical etching method</p></title><aug><au id="A1" ca="yes"><snm>Dang</snm><fnm>Zhiya</fnm><insr iid="I1"/><email>rongmeijiaoyin@gmail.com</email></au><au id="A2"><snm>Breese</snm><mi>BH</mi><fnm>Mark</fnm><insr iid="I1"/><insr iid="I2"/><email>phymbhb@nus.edu.sg</email></au><au id="A3"><snm>Recio-S&#225;nchez</snm><fnm>Gonzalo</fnm><insr iid="I3"/><email>gonzalo.recio@uam.es</email></au><au id="A4"><snm>Azimi</snm><fnm>Sara</fnm><insr iid="I1"/><email>g0800837@nus.edu.sg</email></au><au id="A5"><snm>Song</snm><fnm>Jiao</fnm><insr iid="I1"/><email>g0900737@nus.edu.sg</email></au><au id="A6"><snm>Liang</snm><fnm>Haidong</fnm><insr iid="I1"/><email>g0900728@nus.edu.sg</email></au><au id="A7"><snm>Banas</snm><fnm>Agnieszka</fnm><insr iid="I2"/><email>slsba@nus.edu.sg</email></au><au id="A8"><snm>Torres-Costa</snm><fnm>Vicente</fnm><insr iid="I3"/><email>vicente.torres@uam.es</email></au><au id="A9"><snm>Mart&#237;n-Palma</snm><mnm>Jos&#233;</mnm><fnm>Ra&#250;l</fnm><insr iid="I3"/><email>rauljose.martin@uam.es</email></au></aug><insg><ins id="I1"><p>Centre For Ion Beam Applications (CIBA), Department Of Physics, National University Of Singapore, Singapore, 117542, Singapore</p></ins><ins id="I2"><p>Singapore Synchrotron Light Source (SSLS), National University of Singapore, 5 Research Link, Singapore, 117603, Singapore</p></ins><ins id="I3"><p>Departamento De F&#237;sica Aplicada, Universidad Aut&#243;noma De Madrid, Cantoblanco, Madrid, 28049, Spain</p></ins></insg><source>Nanoscale Research Letters</source><section><title><p>SI: Porous Semiconductors - Science and Technology 2012 (PSST 2012)</p></title></section><issn>1556-276X</issn><pubdate>2012</pubdate><volume>7</volume><issue>1</issue><fpage>416</fpage><url>http://www.nanoscalereslett.com/content/7/1/416</url><xrefbib><pubidlist><pubid idtype="doi">10.1186/1556-276X-7-416</pubid><pubid idtype="pmpid">22824206</pubid></pubidlist></xrefbib></bibl><history><rec><date><day>27</day><month>4</month><year>2012</year></date></rec><acc><date><day>23</day><month>7</month><year>2012</year></date></acc><pub><date><day>23</day><month>7</month><year>2012</year></date></pub></history><cpyrt><year>2012</year><collab>Dang et al.; licensee Springer.</collab><note>This is an Open Access article distributed under the terms of the Creative Commons Attribution License (<url>http://creativecommons.org/licenses/by/2.0</url>), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</note></cpyrt><kwdg><kwd>Proton beam writing</kwd><kwd>Defect density</kwd><kwd>Photonic band structure</kwd></kwdg><abs><sec><st><p>Abstract</p></st><p>A method for fabrication of three-dimensional (3D) silicon nanostructures based on selective formation of porous silicon using ion beam irradiation of bulk p-type silicon followed by electrochemical etching is shown. It opens a route towards the fabrication of two-dimensional (2D) and 3D silicon-based photonic crystals with high flexibility and industrial compatibility. In this work, we present the fabrication of 2D photonic lattice and photonic slab structures and propose a process for the fabrication of 3D woodpile photonic crystals based on this approach. Simulated results of photonic band structures for the fabricated 2D photonic crystals show the presence of TE or TM gap in mid-infrared range.</p></sec></abs></fm><bdy><sec><st><p>Background</p></st><p>Periodically modulated refractive-index structures, i.e., a photonic crystal which can modulate the flow of electromagnetic waves, exhibit photonic band gaps under certain conditions <abbrgrp><abbr bid="B1">1</abbr><abbr bid="B2">2</abbr></abbrgrp>. As electron mobility in a semiconductor can be controlled by engineering the electronic bands of these materials, electromagnetic wave propagation inside a photonic crystal may be manipulated by machining its photonic bands <abbrgrp><abbr bid="B3">3</abbr></abbrgrp>. Silicon-based photonic crystals are one of the most promising choices due to their easy integration in silicon technology, allowing applications in several fields, such as optical devices, including waveguides <abbrgrp><abbr bid="B4">4</abbr><abbr bid="B5">5</abbr></abbrgrp>, resonators <abbrgrp><abbr bid="B6">6</abbr></abbrgrp>, etc. A lot of work has been reported on the fabrication and theoretical study of two-dimensional (2D) silicon-based photonic crystals <abbrgrp><abbr bid="B7">7</abbr></abbrgrp> because of the advantages of easy integration and applications in planar platforms <abbrgrp><abbr bid="B8">8</abbr></abbrgrp>, such as planar waveguides <abbrgrp><abbr bid="B9">9</abbr><abbr bid="B10">10</abbr></abbrgrp>. Porous silicon-based photonic crystal is another promising candidate to be integrated in silicon technology <abbrgrp><abbr bid="B7">7</abbr><abbr bid="B8">8</abbr><abbr bid="B11">11</abbr></abbrgrp>. To completely manipulate the flow of electromagnetic waves, a three-dimensional (3D) photonic crystal with complete band gap is required. Many methods have been reported to be able to fabricate 3D silicon-based photonic crystals with 3D complete band gap, such as double-angled reactive ion etching <abbrgrp><abbr bid="B12">12</abbr></abbrgrp>, macropore formation in silicon <abbrgrp><abbr bid="B13">13</abbr></abbrgrp>, glancing-angle deposition <abbrgrp><abbr bid="B14">14</abbr></abbrgrp>, and colloidal self-assembly <abbrgrp><abbr bid="B15">15</abbr></abbrgrp>. One type of 3D photonic crystal that has attracted great attention is the 3D woodpile structure. Several techniques have been reported on the fabrication of 3D silicon-based woodpile structures, such as silicon double-inverse method <abbrgrp><abbr bid="B16">16</abbr></abbrgrp> and layer-by-layer approach <abbrgrp><abbr bid="B17">17</abbr></abbrgrp>. However, in the year 2000, Chow et al. reported the fabrication of a 2D photonic crystal slab capable of fully controlling light in all three dimensions <abbrgrp><abbr bid="B18">18</abbr></abbrgrp>, where the periodic dielectric structure is in only two dimensions, and index guiding is used to confine light in the third one. Most of the reported silicon-based photonic slabs are based on silicon-on-insulator platform <abbrgrp><abbr bid="B4">4</abbr><abbr bid="B5">5</abbr><abbr bid="B6">6</abbr></abbrgrp>.</p><p>In the present work, a method to fabricate 2D/3D silicon-based photonic crystals that uses high-energy proton beam writing and subsequent electrochemical etching of p-type bulk silicon wafers is presented. This technique uses either the whole defect regions at high ion fluence to completely inhibit the etching process or localized high defect density at the end-of-range region of high-energy protons at moderate fluence for the fabrication of silicon structures within the bulk silicon at certain depths, based on selective formation of porous silicon in other regions during subsequent anodization. A finely focused, high-energy ion beam <abbrgrp><abbr bid="B19">19</abbr></abbrgrp> is scanned over the silicon wafer surface. As the ion beam penetrates the silicon, the crystal lattice is damaged, producing additional defects, which reduces the localized hole density and hole current <abbrgrp><abbr bid="B20">20</abbr><abbr bid="B21">21</abbr></abbrgrp>. The defect density for light ions, with energies greater than about 50 keV, peaks close to the end of their range <abbrgrp><abbr bid="B22">22</abbr></abbrgrp>. By pausing the focused beam of different energy for different amounts of time at different locations, any pattern of localized damage can be built up. The irradiated wafer is then electrochemically anodized in an electrolyte of Hydrofluoric acid(HF). At a high ion fluence, the irradiated regions completely inhibit the formation of porous silicon and remain as silicon, based on which, Teo et al. has reported that fabrication of a periodic array of sub-micron diameter pillars is potentially important for the fabrication of photonic crystals <abbrgrp><abbr bid="B23">23</abbr></abbrgrp>. While at a moderate ion fluence, only the buried regions with high defect density inhibit the porous silicon formation process. Thus, as the sample is etched beyond the depth of the ion range, the structure starts to become undercut due to isotropic etching, producing a silicon core that is surrounded by porous silicon. Multiple-energy proton irradiation can be used to create localized defects at different depths within the silicon wafer to fabricate multilevel 3D structures <abbrgrp><abbr bid="B24">24</abbr></abbrgrp>. By varying the proton energy, the penetration depth changes, and subsequent etch steps enable the fabrication of true 3D silicon freestanding structures.</p><p>Additionally in this work, some sample structures of 2D photonic crystals are shown: a square lattice of silicon pillars in an air matrix, which utilize the complete inhibition of etching in irradiated regions, and a 2D photonic slab of air holes in silicon matrix, which utilizes the highly damaged regions at the end of range of ions in silicon. Theoretical photonic band structures of these structures were calculated, showing a complete transverse magnetic (TM) gap for the first structure and several complete transverse electric (TE) gaps for the second one. To further explore the fabrication of 3D photonic crystal structure using this approach, the fabrication of 3D silicon-based woodpile structure is proposed, and its initial result is shown.</p></sec><sec><st><p>Methods</p></st><p>A nuclear microprobe at the Centre for Ion Beam Applications, National University of Singapore, was used <abbrgrp><abbr bid="B25">25</abbr></abbrgrp>. High-energy protons with 200 keV to 1 MeV can be focused down to 100 nm. By controlling the duration time of protons on different points of the surface of a 0.02- or 0.4-&#937;&#183;cm p-type silicon wafer, designed defect distributions in the silicon wafers were built. Etching for irradiated silicon wafers was performed in an electrolyte of HF (48%): ethanol in the ratio of 1:1, with a current density of 40 mA/cm<sup>2</sup> for 0.02-&#937;&#183;cm and 60 mA/cm<sup>2</sup> for 0.4-&#937;&#183;cm wafers. A further step of dipping in KOH solution removed the porous silicon.</p><sec><st><p>2D photonic lattice on silicon substrate: silicon pillars with square lattice</p></st><p>At high ion fluences, which are 1&#8201;&#215;&#8201;10<sup>17</sup>/cm<sup>2</sup> for 0.02-&#937;&#183;cm, and 1&#8201;&#215;&#8201;10<sup>16</sup>/cm<sup>2</sup> for 0.4-&#937;&#183;cm wafers, the defect density along the irradiation regions from the top surface to the end-of-range region is high enough to completely inhibit the electrochemical etching processes with the above etching conditions. As shown in Figure <figr fid="F1">1</figr>a, irradiation of 1-MeV protons with a high ion fluence in bulk silicon results in defect regions with high-enough density along the full range of 16.3 &#956;m, which protons can penetrate. During electrochemical etching process, porous silicon is selectively formed in the nonirradiated regions, as shown in Figure <figr fid="F1">1</figr>b. The etching time for different current densities and wafer resistivity was well controlled to keep the etching depth less than 16.3 &#956;m. After removal of porous silicon in KOH solution, silicon structures on the substrate were obtained, as in Figure <figr fid="F1">1</figr>c.</p><fig id="F1"><title><p>Figure 1 </p></title><caption><p><b>Schematic cross-section view of 2D photonic lattice fabrication on silicon substrate. (a)</b> Proton beam-writing process and resultant defect distribution. <b>(b)</b> Selective formation of porous silicon in subsequent electrochemical etching in HF electrolyte. <b>(c)</b> Removal of porous silicon in KOH solution.</p></caption><text>
   <p><b>Schematic cross-section view of 2D photonic lattice fabrication on silicon substrate. </b>(<b>a</b>) Proton beam-writing process and resultant defect distribution. (<b>b</b>) Selective formation of porous silicon in subsequent electrochemical etching in HF electrolyte. (<b>c</b>) Removal of porous silicon in KOH solution.</p>
</text><graphic file="1556-276X-7-416-1"/></fig><p>Patterns with square lattice of silicon pillars were designed with different periods for proton beam writing. Figure <figr fid="F2">2</figr>a shows a scanning electron microscope (SEM) image at 25&#176; tilt. A 0.4-&#937;&#183;cm wafer was irradiated with a square lattice pattern with a 2-&#956;m period using 1-MeV protons, which were focused to 400 nm in both directions, with fluence 5&#8201;&#215;&#8201;10<sup>16</sup>/cm<sup>2</sup>. After etching with 60 mA/cm<sup>2</sup> for 5 min and removing porous silicon with a KOH solution, silicon pillars in Figure <figr fid="F2">2</figr>a were obtained. In Figure <figr fid="F2">2</figr>b, a 0.4-&#937;&#183;cm wafer was irradiated with a square lattice with a larger period of 4 &#956;m and a smaller beam size of 200 nm, with the same fluence, and etched for 6 min at the same current density.</p><fig id="F2"><title><p>Figure 2 </p></title><caption><p><b>Titled scanning electron microscope images of silicon pillars in square lattice. (a)</b> Period of 2 &#956;m with a large <it>r</it>/<it>a</it> ratio, where <it>r</it> is the radius of the pillars and <it>a</it> is the lattice period . <b>(b)</b> Period of 4 &#956;m with a small <it>r</it>/<it>a</it> ratio.</p></caption><text>
   <p><b>Titled scanning electron microscope images of silicon pillars in square lattice. </b>(<b>a</b>) Period of 2 &#956;m with a large <it>r</it>/<it>a</it> ratio, where <it>r</it> is the radius of the pillars and <it>a</it> is the lattice period. (<b>b</b>) Period of 4 &#956;m with a small <it>r</it>/<it>a</it> ratio.</p>
</text><graphic file="1556-276X-7-416-2"/></fig></sec><sec><st><p>2D freestanding photonic slab: a photonic slab with square lattice of air hole in silicon matrix</p></st><p>Figure <figr fid="F3">3</figr> shows the defect density distribution versus depth for 250-keV and 1-MeV protons in silicon from Stopping and Ranges of Ions in Matter (SRIM) simulation <abbrgrp><abbr bid="B22">22</abbr></abbrgrp>. Most of the defects concentrate at the end-of-range regions where the ions stop. At a moderate fluence for 250-keV protons, regions with high-enough defect density to inhibit formation of porous silicon are only located at a depth around 2.4 &#956;m; thus, buried silicon wires form surrounded by porous silicon.</p><fig id="F3"><title><p>Figure 3 </p></title><caption><p><b>Defect distribution from SRIM calculation.</b> Defect density distribution along the trajectory of ions for 250-keV and 1-MeV protons in silicon.</p></caption><text>
   <p><b>Defect distribution from SRIM calculation.</b> Defect density distribution along the trajectory of ions for 250-keV and 1-MeV protons in silicon.</p>
</text><graphic file="1556-276X-7-416-3"/></fig><p>To obtain freestanding structures, a high-energy proton beam of 1 MeV, which has a deep penetration depth in silicon, was used to irradiate lines with an extremely high fluence, 1&#8201;&#215;&#8201;10<sup>12</sup>/cm, at the same area which function as supports, as in Figure <figr fid="F4">4</figr>a. Line fluence is used here in the line irradiation case where the size of ion beam is smaller than the lateral width of high defect regions. In subsequent electrochemical etching, the etching time and current density for different resistivity wafers were carefully controlled to completely undercut the end-of-range regions of 250-keV protons, but not reach the end-of-range of 1-MeV protons, as in Figure <figr fid="F4">4</figr>b. Subsequent dipping in dilute KOH solution removed the porous silicon, and freestanding silicon wires supported by thick walls were obtained, as in Figure <figr fid="F4">4</figr>c. Figure <figr fid="F4">4</figr>d shows freestanding silicon wires with three different spacings, where 250-keV protons were focused to 100 nm and irradiated with a line fluence of 1&#8201;&#215;&#8201;10<sup>11</sup>/cm. Based on this, fabrication of a 2D photonic slab of a square lattice of air holes in a silicon matrix was designed.</p><fig id="F4"><title><p>Figure 4 </p></title><caption><p><b>Schematic of fabrication of freestanding silicon wires. (a)</b> Proton beam-writing process and resultant defect distribution in cross-section view. <b>(b)</b> Selective formation of porous silicon in subsequent electrochemical etching. <b>(c)</b> Removal of porous silicon in KOH solution. <b>(d)</b> SEM image of freestanding silicon wires with three different spacings.</p></caption><text>
   <p><b>Schematic of fabrication of freestanding silicon wires. </b>(<b>a</b>) Proton beam-writing process and resultant defect distribution in cross-section view. (<b>b</b>) Selective formation of porous silicon in subsequent electrochemical etching. (<b>c</b>) Removal of porous silicon in KOH solution. (<b>d</b>) SEM image of freestanding silicon wires with three different spacings.</p>
</text><graphic file="1556-276X-7-416-4"/></fig><p>Two sets of lines were irradiated horizontally and vertically in the same area using 250-keV protons on 0.02-&#937;&#183;cm silicon wafers to create defect distribution, as shown in Figure <figr fid="F5">5</figr>a, in which the defect density at the intersecting parts of the lines is doubled. Thus, in the etching process, the surrounding area of the intersecting part is not etched as well, giving rise to the formation of porous silicon in circular regions, as shown in Figure <figr fid="F5">5</figr>b. After 4 min of etching with a current density of 40 mA/cm<sup>2</sup> and a subsequent removal of porous silicon, a freestanding 2D photonic slab with a square lattice of air hole in silicon matrix was obtained, as shown in Figure <figr fid="F5">5</figr>c. This structure was fabricated with an ion fluence of 8&#8201;&#215;&#8201;10<sup>10</sup>/cm with a period of 1.5 &#956;m.</p><fig id="F5"><title><p>Figure 5 </p></title><caption><p><b>Fabrication of 2D photonic slab with square lattice of air hole in a silicon matrix. (a)</b> Proton beam-writing process and resultant 3D defect distribution. <b>(b)</b> Selective formation of porous silicon in circular regions in subsequent electrochemical etching in HF electrolyte. <b>(c)</b> SEM image of the freestanding photonic slab structure after removal of porous silicon.</p></caption><text>
   <p><b>Fabrication of 2D photonic slab with square lattice of air hole in a silicon matrix. </b>(<b>a</b>) Proton beam-writing process and resultant 3D defect distribution. (<b>b</b>) Selective formation of porous silicon in circular regions in subsequent electrochemical etching in HF electrolyte. (<b>c</b>) SEM image of the freestanding photonic slab structure after removal of porous silicon.</p>
</text><graphic file="1556-276X-7-416-5"/></fig></sec><sec><st><p>3D woodpile structure</p></st><p>By tuning the energy of ions, end-of-range regions with high defect density at moderate ion fluence can be generated at different depths in the wafer, and after a subsequent electrochemical anodization, silicon wires at different depths of the silicon wafer were obtained. SRIM <abbrgrp><abbr bid="B22">22</abbr></abbrgrp> calculations in Figure <figr fid="F6">6</figr>a show that the range of protons in silicon varies from 1.8 to 16.3 &#956;m when the proton energy increases from 200 keV to 1 MeV.</p><fig id="F6"><title><p>Figure 6 </p></title><caption><p><b>Fabrication of 3D woodpile structures. (a)</b> Range of protons in silicon as a function of proton energy from SRIM calculation. <b>(b)</b> Regions with high defect density at four different depths using four energies with accurate alignment (dashed line demonstrates the silicon wires of the fourth layer is located half of period with respect to the second layer). <b>(c)</b> SEM image of the initial result on a two-layer structure.</p></caption><text>
   <p><b>Fabrication of 3D woodpile structures. </b>(<b>a</b>) Range of protons in silicon as a function of proton energy from SRIM calculation. (<b>b</b>) Regions with high defect density at four different depths using four energies with accurate alignment (dashed line demonstrates the silicon wires of the fourth layer is located half of period with respect to the second layer). (<b>c</b>) SEM image of the initial result on a two-layer structure.</p>
</text><graphic file="1556-276X-7-416-6"/></fig><p>Here, we propose the fabrication of a 3D woodpile structure using proton beam writing to generate end-of-range regions with high defect density at different depths. In order to fabricate woodpile structure with one period, protons with four different energies, E<sub>1</sub>, E<sub>2</sub>, E<sub>3</sub>, and E<sub>4</sub>, will be required to irradiate lines in the same area with suitable fluence and alignment, as shown in Figure <figr fid="F6">6</figr>b. Figure <figr fid="F6">6</figr>c shows an initial result on two-layer freestanding silicon wires in two directions using 250 and 200-keV protons, respectively, in 0.02-&#937;&#183;cm silicon wafers supported by thick walls from 1-MeV protons. By carefully controlling the alignment, ion energy, ion fluence, and etching current density, a 3D woodpile structure with complete band gap lying in the mid-infrared (IR) range should be possible.</p></sec></sec><sec><st><p>Results and discussions</p></st><p>The MIT photonic band package <abbrgrp><abbr bid="B26">26</abbr></abbrgrp> has been used to study the photonic band structure (PBS) of these photonic crystal structures. The software is based on conjugate-gradient minimization of the Rayleigh quotient in a plane-wave basis <abbrgrp><abbr bid="B27">27</abbr></abbrgrp>.</p><sec><st><p>PBS for silicon pillars with square lattice in an air matrix on silicon substrates</p></st><p>Figure <figr fid="F7">7</figr>a,b shows the computed 2D PBS for the experimental structures shown in Figure <figr fid="F2">2</figr>a,b, respectively. In both figures, a TM photonic gap opens between the first and second band. However, the gap size is much higher in Figure <figr fid="F7">7</figr>b. This is due to the different concentration factors in both structures. In Figure <figr fid="F7">7</figr>b, the radius of the Si pillars is <it>r</it>&#8201;=&#8201;0.1<it>a</it>, where <it>a</it> is the lattice period, and the gap opens from 0.422 to 0.495 of the normalized frequency. While the radius of the Si pillar in the structure of Figure <figr fid="F7">7</figr>a is <it>r</it>&#8201;=&#8201;0.415<it>a</it>, the gap opens from 0.210 to 0.218 of the normalized frequency. As the first photonic band concentrates its energy in the high-dielectric-constant region, i.e., in the Si pillar, the second band concentrates its energy in the low-dielectric-constant region in order to be orthogonal to the first band <abbrgrp><abbr bid="B3">3</abbr></abbrgrp>. When the ratio <it>r</it>/<it>a</it> is smaller, the different concentration factors between both bands increase, and the gap size is higher. If the radius of the Si pillar is too small, the first band cannot concentrate its energy in them, and the gap disappears.</p><fig id="F7"><title><p>Figure 7 </p></title><caption><p><b>Photonic band structures of square lattice of Si pillars. (a)</b> 2D PBS of the structure shown in Figure <figr fid="F2">2</figr>a. <b>(b)</b> 2D PBS of the structure shown in Figure <figr fid="F2">2</figr>b.</p></caption><text>
   <p><b>Photonic band structures of square lattice of Si pillars. </b>(<b>a</b>) 2D PBS of the structure shown in Figure <figr fid="F2">2</figr>a. (<b>b</b>) 2D PBS of the structure shown in Figure <figr fid="F2">2</figr>b.</p>
</text><graphic file="1556-276X-7-416-7"/></fig><p>On the other hand, in Figure <figr fid="F7">7</figr>a, other gaps open at higher frequencies. Between the third and fourth bands, a gap opens from 0.345 to 0.365 of the normalized frequency, and between the sixth and seventh, from 0.513 to 535. However, no TE gap opens in either structure. The flexibility of the fabrication process allows varying the radius of the Si pillar and the lattice period to tune the frequency ranges where the gaps can be opened for a specific application.</p></sec><sec><st><p>PBS for photonic slab with square lattice of air hole in silicon matrix</p></st><p>In this case, as a freestanding structure was studied, novel approaches were needed. First, the eigenstates of the slab were calculated using a z-supercell approach, where guided bands were unaffected. Then, the light cone was obtained and overlapped <abbrgrp><abbr bid="B28">28</abbr></abbrgrp>.</p><p>Figure <figr fid="F8">8</figr> shows PBS for TE-like modes; bands with even symmetry respect reflections through a <it>z</it> plane (<it>z</it> directions being the height slab direction) for the photonic slab of air holes with square lattice in silicon matrix shown in Figure <figr fid="F5">5</figr>c, with <it>r</it>/<it>a</it>&#8201;=&#8201;0.3125 and <it>h</it>/<it>a</it>&#8201;=&#8201;0.75, where <it>r</it> is the radius of the air hole, <it>h</it> is the thickness of the slab, and <it>a</it> is the period of the lattice.</p><fig id="F8"><title><p>Figure 8 </p></title><caption><p><b>Photonic band structure for TE-like modes for the structure in Figure</b><figr fid="F5">5</figr><b>(c).</b> 2D photonic slab with square lattice of air hole in silicon matrix.</p></caption><text>
   <p><b>Photonic band structure for TE-like modes for the structure in Figure</b><figr fid="F5">5</figr><b>(c).</b> 2D photonic slab with square lattice of air hole in silicon matrix.</p>
</text><graphic file="1556-276X-7-416-8"/></fig><p>It shows two gaps around normalized frequency <it>a</it>/&#955;&#8201;=&#8201;0.26 and 0.29, where <it>a</it>&#8201;=&#8201;1.5 &#956;m. PBS for TM-like modes shows no gap. The frequency range and gap size can be tuned and optimized by varying irradiation and etching conditions. Photonic crystal structures based on this approach of selective formation of porous silicon have an extra degree of tuning from porous silicon, where removal process of porous silicon in KOH etching is not conducted instead. Figure <figr fid="F9">9</figr> shows the gap map of porosity for a photonic slab of square lattice of porous silicon hole in silicon matrix, with <it>r</it>/<it>a</it>&#8201;=&#8201;0.3125 and <it>h</it>/<it>a</it>&#8201;=&#8201;0.75, where <it>r</it> is the radius of the porous silicon hole, <it>h</it> is the thickness of slab, and <it>a</it> is the period of lattice.</p><fig id="F9"><title><p>Figure 9 </p></title><caption><p><b>Gap map of photonic slab of square lattice of porous silicon hole in silicon matrix.</b> With <it>r</it>/<it>a</it>&#8201;=&#8201;0.3125 and <it>h</it>/<it>a</it>&#8201;=&#8201;0.75.</p></caption><text>
   <p><b>Gap map of photonic slab of square lattice of porous silicon hole in silicon matrix.</b> With <it>r</it>/<it>a</it>&#8201;=&#8201;0.3125 and <it>h</it>/<it>a</it>&#8201;=&#8201;0.75.</p>
</text><graphic file="1556-276X-7-416-9"/></fig></sec></sec><sec><st><p>Conclusions</p></st><p>We have shown a highly flexible approach of using electrochemical etching following proton beam writing of bulk p-type silicon wafers to fabricate 2D/3D silicon-based photonic crystals. Simulation studies show that the structure of silicon pillars with square lattice has TM gaps in the mid-IR range, while the structure of air holes with square lattice in silicon matrix has TE gaps in the same wavelength range. Photonic crystals fabricated using this approach have an extra degree of tuning from porous silicon. Based on the platform of bulk wafers and being compatible with silicon technology, this flexible fabrication method is a promising candidate for the development of silicon-based photonic crystals.</p></sec><sec><st><p>Competing interests</p></st><p>The authors declare that they have no competing interests.</p></sec><sec><st><p>Authors&#8217; contributions</p></st><p>ZD carried out the fabrication process. GRS, VTC and RJMP carried out the simulation study. MB and ZD conceived of and designed the 2D photonic structures and 3D woodpile structure. ZD, MB, SA, JS, HL, and AB discussed the results obtained from experiments. ZD wrote the manuscript, and GR and MB helped draft the manuscript. 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